MiTCR T-cell receptor repertoire analysis software

T-cell receptor repertoire analysis software. MiTCR is an open source software package aimed at extraction of information on repertoire of T-cell clones from Next Generation Sequencing NGS data. It is designed with the knowledge of the critical challenges arising in everyday processing of immunological data. The most efficient and fast CDR3 extraction algorithm. Throughput for an average dataset is 50,000 readssec on the standard hardware. Two-stage correction of sequencing and PCR errors.

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MiTCR T-cell receptor repertoire analysis software

DESCRIPTION

T-cell receptor repertoire analysis software. MiTCR is an open source software package aimed at extraction of information on repertoire of T-cell clones from Next Generation Sequencing NGS data. It is designed with the knowledge of the critical challenges arising in everyday processing of immunological data. The most efficient and fast CDR3 extraction algorithm. Throughput for an average dataset is 50,000 readssec on the standard hardware. Two-stage correction of sequencing and PCR errors.

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The site mitcr.milaboratory.com has the following on the homepage, "MiTCR is an open source software package aimed at extraction of information on repertoire of T-cell clones from Next Generation Sequencing NGS data." I noticed that the website also said " It is designed with the knowledge of the critical challenges arising in everyday processing of immunological data." They also stated " The most efficient and fast CDR3 extraction algorithm. Throughput for an average dataset is 50,000 readssec on the standard hardware. Two-stage correction of sequencing and PCR errors."

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